PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco002699.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 229aa    MW: 25256.8 Da    PI: 8.3772
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco002699.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.5e-20108156355
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+W+AeIrdp+    r +r +lg+f taeeAa+a++ a+ +++g
  Aco002699.1 108 YRGVRQRP-WGKWAAEIRDPR----RaARKWLGTFNTAEEAARAYDLAAIEFRG 156
                  9*******.**********82....48************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.8E-35107170IPR001471AP2/ERF domain
PROSITE profilePS5103225.093107164IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-31107164IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-23107165IPR016177DNA-binding domain
PfamPF008472.1E-14108156IPR001471AP2/ERF domain
CDDcd000187.21E-31108165No hitNo description
PRINTSPR003672.2E-11108119IPR001471AP2/ERF domain
PRINTSPR003672.2E-11130146IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MVPKQELHFS EPNSHFCIKA AAAAAAPFSQ LRSEHETAVI VAALVRVLSG QSAAPCRLCG  60
IDGCLGCETF APGGGKNEAV VLNFANGGAA AVAAVAEKRK RRKNKNLYRG VRQRPWGKWA  120
AEIRDPRRAA RKWLGTFNTA EEAARAYDLA AIEFRGARAK LNFPVPDQLP LPPPPPLRET  180
KAQSQQQQQE QKQQKRWEGE DWEMVELWDG LQDLIALDDV ELCFPLFD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-21108165664ATERF1
3gcc_A7e-21108165664ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197102KRKRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020089989.11e-167ethylene-responsive transcription factor ERF109-like
TrEMBLA0A199V2T11e-124A0A199V2T1_ANACO; Ethylene-responsive transcription factor ERF071
STRINGXP_008811407.12e-60(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124236124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-20redox responsive transcription factor 1