PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco004337.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

bZIP

Protein Properties

Length: 250aa MW: 27471.9 Da PI: 5.9768

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco004337.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.2	1.3e-11	119	166	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ l Aco004337.1 119 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFL 166 8999*********************************99998776655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.8E-14	115	179	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.737	117	173	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.4E-14	119	173	No hit	No description
SuperFamily	SSF57959	7.74E-12	119	173	No hit	No description
Pfam	PF00170	2.4E-10	119	168	IPR004827	Basic-leucine zipper domain
CDD	cd14703	4.11E-24	120	170	No hit	No description
PROSITE pattern	PS00036	0	122	137	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence Send to blast
MAQLPPKVPN ITPTHQPAAP WASEFLGFSA ARRGAHRRSV SDSVAFLEEC VGRGGEGLGG 60 FDNNDDQLMA MFPDDAAPVV SSPSDRSGVN GMPCEEAEPT AGAPPQEETT AAEKIVDPKR 120 VKRILANRQS AQRSRVRKLQ YISELERSVT TLQTEVSALS PRVAFLDHQR SLLTVGNSHL 180 KQRIAALAQD NIFKDAHQEE LKKELERLRE VYYQQKLRNM DAPDFDASVH LEKELLNFEG 240 TTCTLGPTP*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020088724.1	0.0	basic leucine zipper 19-like
Swissprot	Q5JMK6	1e-81	BZP06_ORYSJ; Basic leucine zipper 6
TrEMBL	A0A199VHN6	1e-114	A0A199VHN6_ANACO; Basic leucine zipper 6
STRING	XP_008783934.1	8e-87	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1322	38	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	1e-64	bZIP family protein

Link Out ? help Back to Top
Phytozome	Aco004337.1

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]