PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco004970.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

bZIP

Protein Properties

Length: 147aa MW: 16545.7 Da PI: 8.8278

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco004970.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.9	8.2e-12	70	117	4	51
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r rr+++NRe+ArrsR RKk +eeL+ + + aeN++L+ +l Aco004970.1 70 ERRLRRMISNRESARRSRMRKKRHLEELRSRLARHRAENRELAARLGD 117 6899**************************************998865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.3E-11	67	138	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.7E-10	68	115	No hit	No description
PROSITE profile	PS50217	10.277	69	115	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.6E-9	69	119	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.39E-10	71	116	No hit	No description
CDD	cd14702	6.21E-17	72	120	No hit	No description
PROSITE pattern	PS00036	0	74	89	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence Send to blast
MPFSVDDDAA PLLSLPFSLL EPDFDFGFGF TPWQDSPPPP CDQTGPGTEP ERSLSPPEPD 60 RAAGPSPAEE RRLRRMISNR ESARRSRMRK KRHLEELRSR LARHRAENRE LAARLGDAAH 120 LSALLPRNSD WLRAEFASLC RPRPPL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020092054.1	1e-90	ocs element-binding factor 1-like, partial
TrEMBL	A0A199VPM8	8e-75	A0A199VPM8_ANACO; Ocs element-binding factor 1
STRING	XP_008790285.1	1e-21	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP17765	5	10

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15830.1	1e-14	basic leucine-zipper 3

Link Out ? help Back to Top
Phytozome	Aco004970.1