PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco005167.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family G2-like
Protein Properties Length: 228aa    MW: 26160.8 Da    PI: 7.8869
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco005167.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.41.3e-2777134155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPkti...lelmkvkgLtlehvkSHLQkYRl 55 
                  +prlrWtpeLH+rFv av++LGG+++A P +i   +e+m+v+gLtl hvkSHLQkYR 
  Aco005167.1  77 RPRLRWTPELHDRFVVAVARLGGPNEAKPTAIkqsMEAMGVHGLTLRHVKSHLQKYRA 134
                  59***************************87733367889*****************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.0E-2576135IPR009057Homeodomain-like
PROSITE profilePS512949.91977137IPR017930Myb domain
SuperFamilySSF466897.17E-1477135IPR009057Homeodomain-like
TIGRFAMsTIGR015577.8E-2078134IPR006447Myb domain, plants
PfamPF002493.3E-879133IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MRISLSKINY LLSIIAINKV SNLFILLFQK FLAFDHFLLQ KMSYNQTQSR GAQISERDIQ  60
FSRIAAQQCC FFGLCPRPRL RWTPELHDRF VVAVARLGGP NEAKPTAIKQ SMEAMGVHGL  120
TLRHVKSHLQ KYRANNKLSK EKEEEQYKEG LNNEEHSHSP APNPHCSRSP ELYCEPASHQ  180
IENCTTFQNE IEQAEKNVEM LKDAHDRYMD SLLERAYTAA ASEFFDS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020093057.11e-171myb family transcription factor PHL11-like isoform X1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.11e-25G2-like family protein