PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco005327.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 259aa    MW: 28572.3 Da    PI: 8.0364
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco005327.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.9e-18105157156
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  s ykGVr+++ +g+++AeIrd s +g  +r++lg+f taeeAa a + a+++++g+
  Aco005327.1 105 SNYKGVRRRP-WGKFAAEIRDLSRRG--ARVWLGTFETAEEAALAFDVAALRMRGP 157
                  57********.**********53333..**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.8E-13105156IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-22105166IPR016177DNA-binding domain
CDDcd000182.75E-30105164No hitNo description
PROSITE profilePS5103223.248106164IPR001471AP2/ERF domain
SMARTSM003802.1E-36106170IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-30106165IPR001471AP2/ERF domain
PRINTSPR003671.2E-10107118IPR001471AP2/ERF domain
PRINTSPR003671.2E-10130146IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MAIQLQTLEA DETILETIWS SFITGNAPKC SQPGSERGEA QLAMLERLPS LGRWISMGAE  60
SWEELLGGII SSDGCRSASP TNSATQHCLS PTAECPKAEK VASSSNYKGV RRRPWGKFAA  120
EIRDLSRRGA RVWLGTFETA EEAALAFDVA ALRMRGPRTR LNFPLEVVES ASSEATWIEK  180
PQRSASSTCP ACPLYGFTVT SQKSKRRRKR KWNYTEEVVH EVPAQKRTSC IQEIVSTQTD  240
VVVLQDLGSE YLERLLSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-26102167166ATERF1
3gcc_A3e-26102167166ATERF1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204210KRRRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020098403.10.0ethylene-responsive transcription factor 2-like
TrEMBLA0A199ULC20.0A0A199ULC2_ANACO; Ethylene-responsive transcription factor 2
STRINGXP_008798293.11e-86(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP116162736
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.11e-19ethylene responsive element binding factor 2