PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco005538.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 419aa    MW: 43981.7 Da    PI: 6.5527
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco005538.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_172.36.9e-23280342163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+elkrerrkq+NRe+ArrsR+RK+ae+eeL+ kv++L+aeN++L++e+++l+++++kl+ e+
  Aco005538.1 280 ERELKRERRKQSNRESARRSRLRKQAETEELAIKVESLSAENSSLRSEINQLTENSEKLRLEN 342
                  89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.4E-30192IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165968.9E-6131229No hitNo description
Gene3DG3DSA:1.20.5.1706.3E-19274339No hitNo description
PfamPF001707.9E-21280342IPR004827Basic-leucine zipper domain
SMARTSM003383.2E-22280344IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.518282345IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.0E-11283339No hitNo description
CDDcd147027.28E-23285333No hitNo description
PROSITE patternPS000360287302IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MGNEEAAAPP KSDKSASPVQ DQPVVYPYPD WAAMQAYYGP GVMPPPYFGA AVAPGHAPPP  60
YMWAPQPLLP PFGSPYAPIY SPGGVYSHPS APIGSHVHSQ GVSPSSASRG ALVTANPSST  120
DLPAKSASNK DKGPTKKLKG LDGISVSVDD ENAENKSGAD AGSGYNSTDG SSDGSSESGG  180
NGNERKRSSD DRPTSDDCKV DKRANASKGR GTNSSKIPLS VTVATANVVG NPVGSVPSSG  240
SGMDFDITKV KAIGTPVPPP AGVMITGRNG VPPELWAKDE RELKRERRKQ SNRESARRSR  300
LRKQAETEEL AIKVESLSAE NSSLRSEINQ LTENSEKLRL ENSALMEKLK NAGMTQIEEV  360
SPDKMETDGS SSVVVENFLS MIDNPNSASR GVQLDNKEPA KLRQLLGSSQ RTDAVAAN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1296302RRSRLRK
2296303RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020098728.10.0common plant regulatory factor 1-like isoform X1
TrEMBLA0A199W9L40.0A0A199W9L4_ANACO; Common plant regulatory factor 1
STRINGXP_008798658.11e-164(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.12e-31basic region/leucine zipper transcription factor 68