PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco006201.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family WRKY
Protein Properties Length: 555aa    MW: 59545.7 Da    PI: 8.0957
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco006201.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.3e-30310368259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+
  Aco006201.1 310 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRSVLTTTYEGNHNHP 368
                  7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-33294370IPR003657WRKY domain
SuperFamilySSF1182901.14E-27302370IPR003657WRKY domain
PROSITE profilePS5081129.39304370IPR003657WRKY domain
SMARTSM007741.0E-36309369IPR003657WRKY domain
PfamPF031067.5E-27311368IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    Send to blast
MMSSFLGSNL RPKISGALDF PMIVIRDNES GAEKRRVVDE MDFFSSEKKE RVERKKESDA  60
NVPDLRIKKE DLTINMGLHV ASRNSVIDRS VDDGLLSNEE EKETKAELAA VRAELGRMNE  120
ENQRLKNMLS HVTENYNSLH MHLITLMQQK NQAIHEVNGE KIVESAKKGY EGAIMPRQFI  180
ALGSAASLVD EASHSTTEGG SGDRSAGSPT VNNNHEVISM DYGLNKSSSN SNSNNNNNNN  240
NISKERLLDG RDHVIRGAFV REESPDQVSQ SWSKGTKLMS PTKSSDQVHE ATMRKTRVSV  300
RARSEAPMIS DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG CPVRKQVQRC AEDRSVLTTT  360
YEGNHNHPLP PAAMAMASTT TAAASMLLSG SMSSADGLTP PNFLARAVLP CSSSIATISA  420
SAPFPTVTLD LTHSPTPLQF HRPAAPLAFP PPVPPPPPPP QLFGRALYDS TKFSGLHASA  480
GGGGPDNAKV ADSVSAATAA IAADPNFTAA LAAAITSYIG NSGSSSGGGG SRVENMKNNK  540
IYDNKDCSDH NMGG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21296372176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020105405.10.0probable WRKY transcription factor 31 isoform X2
SwissprotQ9XEC31e-131WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A199UXR30.0A0A199UXR3_ANACO; Putative WRKY transcription factor 42
STRINGXP_008797553.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.14e-83WRKY family protein