PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco006716.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 233aa    MW: 25881.8 Da    PI: 4.6363
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco006716.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.2e-1774124256
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                   y+GVr+++ +grWvAeIrdp    +r  r +lg++g+ae Aa+a+ aa+++++ e
  Aco006716.1  74 AYRGVRRRS-SGRWVAEIRDP----IRrVRSWLGTYGSAEAAAEAYRAAAERFRAE 124
                  69****888.8*********7....246999*********************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.05E-1473124IPR016177DNA-binding domain
SMARTSM003801.1E-1474137IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.7E-1974124IPR001471AP2/ERF domain
PROSITE profilePS5103219.37574141IPR001471AP2/ERF domain
PfamPF008471.3E-1074124IPR001471AP2/ERF domain
PRINTSPR003671.8E-67586IPR001471AP2/ERF domain
PRINTSPR003671.8E-697113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MAIRKLRVVF SDPDATDSSS GEEEEEEEED DDEIERRRRR RKKRKRVVYE IPMRSKTLEV  60
EKKKMKGMGS RSSAYRGVRR RSSGRWVAEI RDPIRRVRSW LGTYGSAEAA AEAYRAAAER  120
FRAEQKIGGG GAASPSAASF AAASPSSVLD TSAAERRDPP PEAEEEGRRR SIAELFEIPE  180
MELGAMGAEE EEGFLWGELC GELLIGLDDL PLLDQQLDGC DFSFLDTLDA ST*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13543RRRRRRKKR
23745RRRRKKRKR
33843RRRKKR
43844RRRKKRK
53945RRKKRKR
64045RKKRKR
74365RKRVVYEIPMRSKTLEVEKKKMK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020087386.11e-162ethylene-responsive transcription factor CRF2-like
TrEMBLA0A199W8C91e-159A0A199W8C9_ANACO; Ethylene-responsive transcription factor CRF1
STRINGGSMUA_Achr4P06840_0013e-35(Musa acuminata)