PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco007039.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

S1Fa-like

Protein Properties

Length: 66aa MW: 7340.91 Da PI: 11.6132

Description

S1Fa-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco007039.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	S1FA	104.4	6.2e-33	1	56	15	70
S1FA 15 livllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70 ++vllvvgg+ll+fl gny+ly+ya+k+lP rkkkPvskkklkre+lkqGv++PG+ Aco007039.1 1 MVVLLVVGGVLLLFLAGNYALYTYAKKTLPSRKKKPVSKKKLKRERLKQGVSAPGD 56 89****************************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04689	3.7E-31	1	56	IPR006779	DNA binding protein S1FA
ProDom	PD019013	0.009	14	56	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 66 aa Download sequence Send to blast
MVVLLVVGGV LLLFLAGNYA LYTYAKKTLP SRKKKPVSKK KLKRERLKQG VSAPGDKDRN 60 RRKLT*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010104121.2	3e-22	DNA-binding protein S1FA
Refseq	XP_024026346.1	3e-22	DNA-binding protein S1FA
TrEMBL	A0A199W2E1	3e-29	A0A199W2E1_ANACO; DNA-binding protein S1FA2
STRING	XP_010104121.1	9e-22	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5154	35	63

Link Out ? help Back to Top
Phytozome	Aco007039.1