PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco007475.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

G2-like

Protein Properties

Length: 270aa MW: 30358.8 Da PI: 7.3221

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco007475.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	33.2	1.2e-10	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 +++m+vkgLtl+h+kSHLQk+Rl Aco007475.1 1 MRVMGVKGLTLYHLKSHLQKFRL 23 789*******************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.3E-9	1	24	IPR009057	Homeodomain-like
Pfam	PF14379	1.5E-26	63	110	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MRVMGVKGLT LYHLKSHLQK FRLGKQPHKE FNDHSVKDAA NMSMQRNAPS SSSIMGRSMN 60 ENVHITEAIR MQMEVQRRLH EQLEVQKHLQ MRIEAQGKYM QTILEKAYET LQGDSNIGLG 120 GYTKALGNNT QGVIDMVSMK EMASPMCFPS LQDLHLYGGD HLEIPQQIER PLDMFFPTNE 180 SIAMGSKKRP YPYGSNGKSP MIWADDLRLQ ELGSQEEASK CDQLQIAPSM MDSSIDMGSM 240 ANVYESKPML DITGNKKFEG TSKLDRPSP*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020099716.1	0.0	myb family transcription factor APL
TrEMBL	A0A199V2H0	0.0	A0A199V2H0_ANACO; Myb family transcription factor APL
STRING	XP_008809902.1	1e-123	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2504	38	90

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.1	5e-57	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aco007475.1