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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Aco007890.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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| Family |
GRAS |
| Protein Properties |
Length: 464aa MW: 52191.9 Da PI: 6.4098 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco007890.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 302.8 | 8.3e-93 | 86 | 459 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
l++lLl +A+a+++++++ a +L ++ ++as +gd++qR++ayf+ AL+ r+ + s ly+++ +s+t+ +ee++a++ f+ +sP+++f+h+ta
Aco007890.1 86 LIHLLLFAATAINKNNTSSAVDALHEIYKNASFHGDSIQRVVAYFADALSVRIPSPRSPLYHSIVVSPTP----EEEFSAFTEFYRASPYYQFAHFTA 179
689******************************************************************8....7899999***************** PP
GRAS 99 NqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrled 188
NqaI+ea+e+e r+H+iDfd+s+G+QWp+L+q+L++++ ++p slRiTg+g+ s +eleet+ rL +fA+ + ++ f+f+ + + +
Aco007890.1 180 NQAIVEAFENEekrngGRIHVIDFDVSYGFQWPSLIQSLSDKAssSKPISLRITGFGR----SVDELEETEMRLVNFASGCnNLFFKFEGI-LRG--S 270
**********98888889**********************999745555*********....9***************987369******6.443..3 PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
+ +++r+++ +l+Vnlv+ l++l +s ++ +++L ++ sl P +vv++e+e + + sF+ rf+e+l+yy+a+fdsl++ lp+es er ++E
Aco007890.1 271 STCNDIRIEKYSTLVVNLVFYLQKLS-SSNEM----HDTLATIHSLHPSLVVLIEREGNQSPRSFVSRFMESLHYYAAMFDSLNECLPPESVERLSIE 363
44699*******************97.44444....559*********************************************************** PP
GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.............eesgslvlgWkdrpLvsvS 371
+ lgrei+ +e e h ++e+ ++r+e++GF++++ls+++++qaklll+ + +g ++ +e ++ lgW++r L+++S
Aco007890.1 364 KNHLGREIKCGMDQEDGE---GHFKVESLKQRMERVGFEEMKLSSRTVSQAKLLLKIKS-HGSTMGcgsncggfrvlvrDEGREISLGWQERLLITAS 457
*********998888887...99999999*************************98654.33333322222233333434466777************ PP
GRAS 372 aW 373
W
Aco007890.1 458 GW 459
** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 464 aa
Download sequence Send
to blast |
MNEGAGEELL SLSLGLNSSW CTNTTKMKRK AKDDHEYSNP ACNVTTMQDV EDNKFFNLLH 60 MRDQMLKHDP KRSNGALEGT TNGLQLIHLL LFAATAINKN NTSSAVDALH EIYKNASFHG 120 DSIQRVVAYF ADALSVRIPS PRSPLYHSIV VSPTPEEEFS AFTEFYRASP YYQFAHFTAN 180 QAIVEAFENE EKRNGGRIHV IDFDVSYGFQ WPSLIQSLSD KASSSKPISL RITGFGRSVD 240 ELEETEMRLV NFASGCNNLF FKFEGILRGS STCNDIRIEK YSTLVVNLVF YLQKLSSSNE 300 MHDTLATIHS LHPSLVVLIE REGNQSPRSF VSRFMESLHY YAAMFDSLNE CLPPESVERL 360 SIEKNHLGRE IKCGMDQEDG EGHFKVESLK QRMERVGFEE MKLSSRTVSQ AKLLLKIKSH 420 GSTMGCGSNC GGFRVLVRDE GREISLGWQE RLLITASGWS CRE*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KM662087 | 1e-144 | KM662087.1 Ananas bracteatus clone 45421 microsatellite sequence. |