PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco008079.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bHLH
Protein Properties Length: 253aa    MW: 28002.3 Da    PI: 8.9043
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco008079.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.3e-12185230655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+     +k  + a++L +A+++Ik Lq
  Aco008079.1 185 SIAERERRTRISEKLRKLQELVPNM----DKQTNTADMLDLAIQHIKGLQ 230
                  689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.456179229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-16182243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.53E-10183234No hitNo description
Gene3DG3DSA:4.10.280.104.1E-15184243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-9185230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-12185235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MSTGASRGAF FLQSSSRITE FVIRKLIFLH LASLSLTRDR ESYSRLGSDS DHAVAGDNRR  60
LNSQLSLSFS RQQSTLSQIS EIGLSDVGES SQSDEGNAGH SLAPNGFSIG SWDETNSIVF  120
SAPVSKRGKD NNGDVMASLS HIESQFGLPR SSLEMATMEN FLQIQQDQVP FKVRAKRGCA  180
THPRSIAERE RRTRISEKLR KLQELVPNMD KQTNTADMLD LAIQHIKGLQ SQVQILSQER  240
DDCRCGSKRE KN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020111464.11e-158transcription factor bHLH129-like
TrEMBLA0A199W4W01e-152A0A199W4W0_ANACO; Transcription factor bHLH128
STRINGXP_008783787.11e-101(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70713752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43140.21e-49bHLH family protein