PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco008375.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

G2-like

Protein Properties

Length: 253aa MW: 27576.3 Da PI: 6.1502

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco008375.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	45.3	1.9e-14	4	33	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk+il+lm+vkg+ ++hvkSHLQ+YR+ Aco008375.1 4 EATPKRILQLMGVKGVNISHVKSHLQMYRS 33 69***************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.6E-13	4	36	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	6.3E-10	5	33	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence Send to blast
MVIEATPKRI LQLMGVKGVN ISHVKSHLQM YRSMSSHGGL NTNSIPTEGI DKWMSADCSH 60 LPVRASESRC EYPPMMSSML SCNHSYKIQS LEDVFRGWAS KMTGCTPSSS RFLSTRDQFC 120 SAGLHDQVLQ EQLKCELTLS SSAHRMPTRC EETSEIGSSI EFDTGEEVPK TRETLIPSSL 180 SNRDWPGFDT NGTFSPLFLL PNSAEIFPEL ATFSAKVAPL TPFAAPSLSE LFSIAITSTT 240 SASFFLASSA SL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020109254.1	1e-121	uncharacterized protein LOC109724741 isoform X2
TrEMBL	A0A199VP41	3e-40	A0A199VP41_ANACO; Putative Myb family transcription factor
STRING	XP_008811121.1	2e-28	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5493	37	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04580.1	8e-10	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aco008375.1