PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco009152.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 285aa    MW: 31730 Da    PI: 9.6574
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco009152.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.62.9e-50151411128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                  lppGfrF Ptd el+v+yL kkv+g+ ++l  vi+++++yk++PwdLp ++  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk ++ ++++
  Aco009152.1  15 LPPGFRFFPTDVELLVHYLSKKVSGQLFSL-PVITDIELYKFDPWDLPGRALFGEKEWYFFSPRDRKYPNGSRPNRMAGSGYWKATGTDKVIMGSGKN 111
                  79*************************999.89***************8777899******************************************* PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  + g+kk Lvfy g+apkg+kt+W+mheyrl
  Aco009152.1 112 KLGIKKALVFYVGKAPKGSKTNWIMHEYRL 141
                  ****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-628169IPR003441NAC domain
PROSITE profilePS5100558.43215170IPR003441NAC domain
PfamPF023651.1E-2516141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009737Biological Processresponse to abscisic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MGSGRDPVAV SQLSLPPGFR FFPTDVELLV HYLSKKVSGQ LFSLPVITDI ELYKFDPWDL  60
PGRALFGEKE WYFFSPRDRK YPNGSRPNRM AGSGYWKATG TDKVIMGSGK NKLGIKKALV  120
FYVGKAPKGS KTNWIMHEYR LCSDNNNIPL LATPNSHRLD EWVLCRIYKR MSSHQLTVLK  180
RAPHKCHNLL TTTQLHQHGL YSQAELRVGG APPLCYVGSP SFDMLQSSSS AEDEVDSSFL  240
FPSRQAQQST SSSSSYQYDG NANAIVSRFL QSAAGESLNQ SFGF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-81617510170NO APICAL MERISTEM PROTEIN
1ut4_B5e-81617510170NO APICAL MERISTEM PROTEIN
1ut7_A5e-81617510170NO APICAL MERISTEM PROTEIN
1ut7_B5e-81617510170NO APICAL MERISTEM PROTEIN
3swm_A6e-811017515173NAC domain-containing protein 19
3swm_B6e-811017515173NAC domain-containing protein 19
3swm_C6e-811017515173NAC domain-containing protein 19
3swm_D6e-811017515173NAC domain-containing protein 19
3swp_A6e-811017515173NAC domain-containing protein 19
3swp_B6e-811017515173NAC domain-containing protein 19
3swp_C6e-811017515173NAC domain-containing protein 19
3swp_D6e-811017515173NAC domain-containing protein 19
4dul_A5e-81617510170NAC domain-containing protein 19
4dul_B5e-81617510170NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factors that bind specifically to the 5'-CATGTG-3' motif. {ECO:0000269|PubMed:15319476}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly induced by drought, high salinity and abscisic acid (ABA). Slightly up-regulated by cold treatment. Not induced by jasmonic acid. {ECO:0000269|PubMed:15319476, ECO:0000269|Ref.7}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020095274.10.0NAC domain-containing protein 72
SwissprotQ93VY32e-83NAC72_ARATH; NAC domain-containing protein 72
TrEMBLA0A199W7980.0A0A199W798_ANACO; NAC domain-containing protein 72
STRINGXP_004514350.19e-84(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44143071
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.29e-85NAC family protein
Publications ? help Back to Top
  1. Zhu X, et al.
    Jasmonic acid promotes degreening via MYC2/3/4- and ANAC019/055/072-mediated regulation of major chlorophyll catabolic genes.
    Plant J., 2015. 84(3): p. 597-610
    [PMID:26407000]
  2. Li S, et al.
    The role of ANAC072 in the regulation of chlorophyll degradation during age- and dark-induced leaf senescence.
    Plant Cell Rep., 2016. 35(8): p. 1729-41
    [PMID:27154758]
  3. Ye H, et al.
    RD26 mediates crosstalk between drought and brassinosteroid signalling pathways.
    Nat Commun, 2017. 8: p. 14573
    [PMID:28233777]