PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco009511.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 377aa    MW: 42555.9 Da    PI: 4.471
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco009511.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-18119168255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  +++++g
  Aco009511.1 119 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDVEARRIRG 168
                  69*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.99E-22119177IPR016177DNA-binding domain
CDDcd000182.18E-33119178No hitNo description
SMARTSM003802.3E-38119182IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-32119178IPR001471AP2/ERF domain
PROSITE profilePS5103224.236119176IPR001471AP2/ERF domain
PRINTSPR003671.1E-11120131IPR001471AP2/ERF domain
PfamPF008471.8E-11120168IPR001471AP2/ERF domain
PRINTSPR003671.1E-11142158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MCGGAIISGD IPTTAAELLW PGLKNKSKNK YKNKKNKQRS SKLVEIEEEE EEEEEEEDFE  60
ADFEEFEDES EEVEEAEEIE FKPFASVAPP LKRECSTTLR SADFDGHSVR IASRKRKNQY  120
RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN TAEEAARAYD VEARRIRGKK AKVNFPESGS  180
SAQKRHQKQK PIPPSVPKPN STENLNFTGS FGSLNYADGN FVSDYRGIVE EKQLKTPQTD  240
PTCFRATNHF SDQGSNSFDC SDFAWEPEIK YPETTSLLTP SVNNSDETQF VEHGSNPLKK  300
LKGDSGEAVA VEENKEVKLV DELDFEPYLK FLQFPDIEES SYETIDGLFN GDAAQDGVSL  360
VDLWSFDDLP MEGSVY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-21119176260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020098103.10.0ethylene-responsive transcription factor 1-like
TrEMBLA0A199VIK90.0A0A199VIK9_ANACO; Ethylene-responsive transcription factor 1
STRINGXP_008784363.11e-104(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103938134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.37e-41related to AP2 12