PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco009649.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 145aa    MW: 15797.7 Da    PI: 7.0731
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco009649.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2262.4e-08450153
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53
                 sgykGV+   + g+W+A+         + +++ lg++ +++ Aa a+++a+ k+
  Aco009649.1  4 SGYKGVS-PGSPGKWLASAEF------NgRNVLLGTHPSEDAAALAHDRAAIKI 50
                 89*****.7779****99444......34**********9999*******9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.94E-11462IPR016177DNA-binding domain
PfamPF008471.5E-5451IPR001471AP2/ERF domain
SMARTSM003803.7E-6567IPR001471AP2/ERF domain
PROSITE profilePS5103212.497561IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-9662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MECSGYKGVS PGSPGKWLAS AEFNGRNVLL GTHPSEDAAA LAHDRAAIKI AGDPDAPHNF  60
PAEAFGSLEF MFSSQFSKRK VFKMIREGSY DEHLRAYLTN FYRTARPPIA SFSEAEFVEN  120
QKSRAVKGHS TVLSLPEAWV SNSD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-