PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco009782.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

BES1

Protein Properties

Length: 76aa MW: 8818.06 Da PI: 8.5047

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco009782.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	137.1	1.8e-42	3	75	2	74
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgsk 74 s r+pt++ErEnn RERrRR ++a+i+aGLRa+Gny+lpk+aD+neVlkALc eAGw ve+DGt+y k +k Aco009782.1 3 VSLRRPTERERENNCERERRRRMVTARIFAGLRAHGNYCLPKHADQNEVLKALCDEAGWHVEEDGTVYCKICK 75 588*****************************************************************99876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.7E-37	5	75	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 76 aa Download sequence Send to blast
MTVSLRRPTE RERENNCERE RRRRMVTARI FAGLRAHGNY CLPKHADQNE VLKALCDEAG 60 WHVEEDGTVY CKICK*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-18	26	75	392	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-18	26	75	392	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-18	26	75	392	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-18	26	75	392	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006829668.1	8e-32	protein BZR1 homolog 3
Swissprot	Q6EUF1	6e-20	BZR4_ORYSJ; Protein BZR1 homolog 4
TrEMBL	A0A199VKG4	6e-31	A0A199VKG4_ANACO; Protein BRASSINAZOLE-RESISTANT 2
TrEMBL	W1NQJ5	2e-30	W1NQJ5_AMBTC; Uncharacterized protein
STRING	ERM97084	3e-31	(Amborella trichopoda)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13201	30	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75080.2	8e-21	BES1 family protein

Link Out ? help Back to Top
Phytozome	Aco009782.1