PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco009876.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family WRKY
Protein Properties Length: 1075aa    MW: 114915 Da    PI: 6.8713
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco009876.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.63.4e-30268326259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+a+d++++++tYeg+Hnh+
  Aco009876.1 268 SDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCAQDTSILITTYEGTHNHP 326
                  7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.0E-32252328IPR003657WRKY domain
SuperFamilySSF1182903.66E-27260328IPR003657WRKY domain
PROSITE profilePS5081129.379262328IPR003657WRKY domain
SMARTSM007745.5E-37267327IPR003657WRKY domain
PfamPF031068.6E-27269326IPR003657WRKY domain
SuperFamilySSF546316.03E-15677750No hitNo description
PROSITE profilePS513718.662679744IPR000644CBS domain
Gene3DG3DSA:3.10.580.101.1E-8683743No hitNo description
SMARTSM0011613683739IPR000644CBS domain
SuperFamilySSF546316.03E-15817891No hitNo description
Gene3DG3DSA:3.10.580.101.1E-8829891No hitNo description
PROSITE profilePS513717.111841904IPR000644CBS domain
SMARTSM0011634845894IPR000644CBS domain
SuperFamilySSF546311.34E-249081062No hitNo description
PROSITE profilePS5137111.851918979IPR000644CBS domain
CDDcd046421.94E-379211051No hitNo description
Gene3DG3DSA:3.10.580.101.7E-199221052No hitNo description
SMARTSM001167.8E-8922971IPR000644CBS domain
PfamPF005711.5E-7922971IPR000644CBS domain
PROSITE profilePS5137110.8519991059IPR000644CBS domain
SMARTSM001167.7E-710041053IPR000644CBS domain
PfamPF005711.5E-510041050IPR000644CBS domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1075 aa     Download sequence    Send to blast
MEVVMKKAAF KEEIKDVELM GDEDNGELRR ENVMINRDIR RSSSPANKVL SFSKQVPPTI  60
SRERSPMDNS IKPSPADTKV NSITQLDRLE MTKAEMGEVR EENERLKMIL ARIVKDYQSL  120
HVQFLDIFQQ DQAKKLPNDT STNLDDHIED QELVSLSLGT SSSGQKKEDK LISVSKNKEY  180
DEPNGGGLTL GLECKFEGSS GDKHEVPMTN VSSDNSFEEA KEVEAGEPWP PSKIFKNIRS  240
GEDEVLQQPQ VKKARVSVRA RCDAPTMSDG CQWRKYGQKI AKGNPCPRAY YRCTVAPGCP  300
VRKQVQRCAQ DTSILITTYE GTHNHPLPIS ATAMASTTSA AASMLMSGSS ASSPAIGSHT  360
AASAAATTTL NGLKFSLADP SKTNQLIYFP TPSLSSAASH PTITLDLTAP SSSSSSSASQ  420
PSFFSTFSSN PNPRFSPTGF NFSTSETGST TATLPPSWTS GYLSYASPLH IKSPIGCLNL  480
GSKAQDLSYQ SCMQKIANPS AASPGQNSLT DTIAKAITAD PSFRSALATA ITSYVGAQGG  540
PGDGRAQGLK WGDQLGSGGP IGGSGCASSY LTNSGSPASK PGQHGSLLLP QPTLGFASSK  600
SSTSASAFPN FLSVDCIVDE LLICSKQCTR FLHLLKKPQD GVQLRMPSCD AYFDRIQSKK  660
KLPHSLQESL TSSFARIPVS SFPLVPCGKD TTTVEAIRVL SEHNILAAPV TNPHEITSTE  720
WKEHYLGIID YPAIILWVLE SAELAAAALT AGSATAAGVG AGALGALGVG AVAMGATGPL  780
AVAGLTVAAI GAAVAGGLAA ESGMAKDAPA AADSLGDDFY KVLLQEEPFK STTVKSILQS  840
FHSAPFIPVA QDSSMLTVLL LLSKYRLKNV PVIEDGKPYV KNFITQSAVV QGLNKCKGCN  900
WFDFIAARPL SDFGLPFMSC DEVISIKSDE LILEAFKRMK DNQIGGLPVT EGTTKKLVGS  960
VSIRDIRFLL LKPRLFSDFR HLTVLDFIKT ITSAETELAN TMANPATCAP TTCLGSVIES  1020
LASRSAHRIY VVEGTDQEIV GVVTLRDVIS CFVYEPSDHF NDYFKYKTKE ALNW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-22254328174WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM6621500.0KM662150.1 Ananas bracteatus clone 45581 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020097914.10.0probable WRKY transcription factor 72 isoform X1
STRINGXP_008809713.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP925023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-75WRKY DNA-binding protein 72