PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco010231.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 674aa    MW: 74652.6 Da    PI: 4.321
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco010231.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.13.4e-53191461128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                  l+pGfrFhPtdeelv++yL++k+ g++l++ ++i+evd+yk+ePwdLp+  ++++++ ewyfFs+ d+k+a++ r+nrat +gyWk+tgkd+ev + +
  Aco010231.1  19 LAPGFRFHPTDEELVSYYLRRKILGRPLRV-DAIAEVDLYKCEPWDLPTrsRIRSRDVEWYFFSPLDRKHANKARTNRATPQGYWKTTGKDREVRR-G 114
                  579***************************.99**************94347777888*************************************9.9 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++vg+kktLvf+ grap+ge+t+Wvmheyr+
  Aco010231.1 115 SRVVGMKKTLVFHAGRAPRGERTNWVMHEYRI 146
                  ******************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.54E-6315169IPR003441NAC domain
PROSITE profilePS5100559.29719169IPR003441NAC domain
PfamPF023652.9E-2821146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009644Biological Processresponse to high light intensity
GO:0009962Biological Processregulation of flavonoid biosynthetic process
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 674 aa     Download sequence    Send to blast
MNTRGPSSSS TPPPPSALLA PGFRFHPTDE ELVSYYLRRK ILGRPLRVDA IAEVDLYKCE  60
PWDLPTRSRI RSRDVEWYFF SPLDRKHANK ARTNRATPQG YWKTTGKDRE VRRGSRVVGM  120
KKTLVFHAGR APRGERTNWV MHEYRIEGEE LAQAGISQDS YVVCRIFQKS GSGPQNGAQY  180
GAPFVEEEWD EEVDGLPLMV ENGGEDEFND AGENEFLQMN DFAENQKLDS QHEITPLSAP  240
GLNVLDNTEH PEDPEISLDE ILKDSSFIND ITAYFDEPRD TSGPALNSQL EGNAANTHWS  300
HSPSSQNNGY VELNDFSDYG NMDYFASDDS VAWPLRSDIN NQKPVSGEDG RSDLQEPFNV  360
EEFFDTTDGI SYQNNYSLQP SVMLNNPPLA SESYSREPTD YNTMFYDTPS DNLAMEKNDL  420
FQLNELPNSP TAGSSGIDML EDLAAFFDAA DDNWNLDILD FVQKPEYVVG PHVAEGSSMT  480
QEVEGDDGTN SDSKPKALQS YVIPGVPMLP QADKLTRENK DLNVASDIQK NELSNKSIGK  540
RLASMLGSIP APPAFAEEFP TAPGKSIGPI SVDHSASSVH ISAGVIEVNE LTLARAAENW  600
SLEKSEDGCF LLSCFMSCST SRKSLCFDPR TKMHSGAIWT VLRGGFCFFL LSAVILSVSC  660
AVGMCMYNKP GEL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-481916915168Stress-induced transcription factor NAC1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00059PBMTransfer from AT5G04410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020115128.10.0NAC domain-containing protein 78-like
TrEMBLA0A199UQW50.0A0A199UQW5_ANACO; NAC domain-containing protein 78
STRINGXP_008787444.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP71073650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-92NAC domain containing protein 2