PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco010545.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 106aa    MW: 11208.7 Da    PI: 11.0691
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco010545.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.23e-211968255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr ++ +gr++AeIrdp +   r r++lg+f+tae+Aa+a++aa+++++g
  Aco010545.1 19 HYRGVRKRP-WGRYAAEIRDPAK---RSRVWLGTFDTAEDAARAYDAAALEFRG 68
                 7********.**********844...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.3E-331976IPR001471AP2/ERF domain
CDDcd000183.32E-171976No hitNo description
SMARTSM003803.0E-401982IPR001471AP2/ERF domain
PROSITE profilePS5103224.8031976IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-231977IPR016177DNA-binding domain
PfamPF008471.4E-141968IPR001471AP2/ERF domain
PRINTSPR003679.0E-122031IPR001471AP2/ERF domain
PRINTSPR003679.0E-124258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MAPARKEKGG GGGGAREVHY RGVRKRPWGR YAAEIRDPAK RSRVWLGTFD TAEDAARAYD  60
AAALEFRGPK AKTNFPLPAP ASPTTSTSTP PPPMAIPIPI PSSQP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-251977564ATERF1
3gcc_A3e-251977564ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly and quickly induced by ethylene. {ECO:0000269|PubMed:10945353}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020092017.14e-69ethylene-responsive transcription factor 4-like
SwissprotQ9LW494e-36ERF4_NICSY; Ethylene-responsive transcription factor 4
TrEMBLA0A2G9HCE23e-36A0A2G9HCE2_9LAMI; Uncharacterized protein
STRINGXP_010057374.17e-36(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.11e-22ERF domain protein 11