PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco010602.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 139aa    MW: 14708.3 Da    PI: 10.3598
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco010602.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.39.3e-0950743256
          AP2 32 slgkfgtaeeAakaaiaarkklege 56
                  lg+f+taeeAa+a+++a+ +++g+
  Aco010602.1 50 GLGTFDTAEEAARAYDRAAFAMRGH 74
                 59*********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.8252581IPR001471AP2/ERF domain
SMARTSM003801.2E-94587IPR001471AP2/ERF domain
SuperFamilySSF541716.34E-114982IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.4E-145182IPR001471AP2/ERF domain
CDDcd000182.51E-155181No hitNo description
PfamPF008473.1E-55174IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MEAHRRVVFR RGGKTRAGRR GGGTGIGGAR RRGRVRGGDT RLEPPWGPHG LGTFDTAEEA  60
ARAYDRAAFA MRGHLAVLNF PSEAPALPSS RGGHAGAGPS ASSSSSRAPD DVIEFEYLDD  120
EVLDELLKPE EEKGGKKK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-14221224114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020092861.11e-41LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC54e-20ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A199W9H35e-42A0A199W9H3_ANACO; Ethylene-responsive transcription factor ERF098
STRINGXP_006489745.11e-20(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]