PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco010738.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 353aa    MW: 38015.1 Da    PI: 6.3595
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco010738.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-19125175155
          AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++++GVr+++ +g+++AeIrd +     r  r++lg++ taeeAak ++ a+ +l+g
  Aco010738.1 125 PRFRGVRRRP-WGKYAAEIRDpW-----RrIRVWLGTYNTAEEAAKVYDSAAIQLRG 175
                  689*******.**********88.....55*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.5E-12125175IPR001471AP2/ERF domain
PROSITE profilePS5103222.458126183IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-20126184IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.8E-28126184IPR001471AP2/ERF domain
SMARTSM003808.7E-32126189IPR001471AP2/ERF domain
CDDcd000183.34E-26126185No hitNo description
PRINTSPR003672.8E-9127138IPR001471AP2/ERF domain
PRINTSPR003672.8E-9149165IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048364Biological Processroot development
GO:0048825Biological Processcotyledon development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MEGSSSSSSF VETVIMRTEH VDVTSKPLSS RPRAARSGHR PAAPRTVRVF CDDYDATDSS  60
GDEHEGAHRH PHRRRVRRYV QEIRLEPRPA RSAPSPAEGA KAKAEAGARK RKPAAAAAEE  120
AGGAPRFRGV RRRPWGKYAA EIRDPWRRIR VWLGTYNTAE EAAKVYDSAA IQLRGPHATT  180
NFSTSPTTTA RAPPPPRKNL SSTNLSSSLG YDSAEESHNV SSPTSVLRSF PASAAAAPPP  240
PPPPPQPQPQ RETDESAAGV FALELPDELG FFAPFEDVPL YDDFLGFGAS CEPSLLAEPR  300
GASFLAHGEP AGPLLGSQGL DLGGLTWHAD EDYDEFRDIG DLFALDDPPL VV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-171261821471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00027PBMTransfer from AT4G23750Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020097122.10.0ethylene-responsive transcription factor CRF2-like
TrEMBLA0A199VUA80.0A0A199VUA8_ANACO; Ethylene-responsive transcription factor CRF2
STRINGXP_008783954.12e-99(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.25e-25cytokinin response factor 2