PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco010891.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ARR-B
Protein Properties Length: 663aa    MW: 74417.5 Da    PI: 4.7819
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco010891.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like56.46.6e-18182230252
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 
                  +rl W  eLHerF+ av+ L G+ +A P++il+lm+v+g+tl++++SHLQk
  Aco010891.1 182 ERLLWDFELHERFLAAVDVL-GK-HAAPRKILHLMNVEGVTLKQIASHLQK 230
                  79******************.55.599***********************9 PP
2Response_reg23.33.2e-0948530105
                   SSHHHHHHHHHHHH..ESEEEEESSCTTS.....EHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HH CS
  Response_reg  30 ddgeealellkekd..pDlillDiempgm.....dGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpe 105
                    ++ eal +lkek+  +Dlil+ +          +G++ll++i++e  ++p+i + ah+++e +++ l+ G + +l+Kp + e
   Aco010891.1   4 HSAAEALYTLKEKEgeFDLILIEVHVGFTgfvslTGFKLLEHIENEF-NIPVITMCAHNDQEILHQSLSHGTSFHLTKPLSVE 85 
                   5788999999888888*******76654222334*********9999.9******************************8766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011014.39195IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521722.87E-103120IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.0E-124102No hitNo description
PfamPF000721.2E-5487IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS512949.189178234IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.5E-16178232IPR009057Homeodomain-like
SuperFamilySSF466892.87E-10179230IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-16182230IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 663 aa     Download sequence    Send to blast
LPFHSAAEAL YTLKEKEGEF DLILIEVHVG FTGFVSLTGF KLLEHIENEF NIPVITMCAH  60
NDQEILHQSL SHGTSFHLTK PLSVECLEVL RQKALQKQTK RAIVEGLEHQ LLSKNTTEKD  120
IVSSFIDKSK DILGFYDVVG PRRTVTNVSF LPSSEIAGEE DQSKEDDSSK EEGSEQKKQR  180
RERLLWDFEL HERFLAAVDV LGKHAAPRKI LHLMNVEGVT LKQIASHLQK KKFIAIFKHR  240
MREEKAKKSK KCSNQKPADK PPLLPNPNPN PNPNPNPNPN PPTLSPQQPV LLPRIPSSVK  300
EQYPTRLWTQ IDQRLAYSPS NYLMQTWLKQ KQMSQGTSSN NLFNRLAAQQ QLNQFDDLFG  360
RKNNKEKSIW DINRQTNNCS WYSTSQFCTN SSSLIQERNS TSTVDSTEQN SKSSKRKAQM  420
LSFTEPLFGK NAQEEGEKDK NSFLNERNEQ DSPNFPKQNE NGTNEGSRVV NVTNEGFNSL  480
STKDGLSEQL SGNLLASVED LLGDEASDDT LAMDELNSSS DLSFYASDND WASLEAFWTQ  540
HLQTTEEGKS DMENILADDD FDIVFDTNDV FGTIGEILGY EIESAQQEKD VNKNSVRAQK  600
TASDDKTNGI EEDLEGDAPK SNNSKLEGTN EQSPPLPQLL SAIGESSQEE KYVSDADALA  660
VGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A199V3W30.0A0A199V3W3_ANACO; Transcription factor BOA (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.16e-19response regulator 11