PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco011121.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

bHLH

Protein Properties

Length: 151aa MW: 16442 Da PI: 5.0375

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco011121.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.2	0.00033	21	43	30	54
C...TTS-STCHHHHHHHHHHHHHH CS HLH 30 askapskKlsKaeiLekAveYIksL 54 + ++s l+Ka+i A++YI +L Aco011121.1 21 L--TNSHALNKASIILDATKYIEEL 43 2..34555**************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	6.02E-5	10	56	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.9E-6	18	55	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence Send to blast
MVSREHKKAG LHEKLQLLRS LTNSHALNKA SIILDATKYI EELKEKVVKL NQEVACAQNI 60 VIEDPLPMVT VETLERGFLI NVFSDKSSPG LLVSILEAFE ELGLEVMEAR ASCTDTFRLE 120 AVGAENLAEG VDAHVVKQAV LQSIKNCSGN *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020087299.1	1e-105	transcription factor bHLH61-like isoform X2
TrEMBL	A0A199WB70	2e-84	A0A199WB70_ANACO; Uncharacterized protein
STRING	XP_008782614.1	7e-83	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1393	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10570.1	2e-09	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aco011121.1