PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco011155.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 257aa    MW: 27445.7 Da    PI: 6.047
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco011155.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.83e-09991322555
          AP2  25 ng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ng   + kr +lg+f+taeeAa+ +++a+ +++g
  Aco011155.1  99 NGavdVGKRLWLGTFDTAEEAAAVYDRAAVRIKG 132
                  6675566**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003808.4E-1266146IPR001471AP2/ERF domain
PROSITE profilePS5103215.11973140IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-15104141IPR001471AP2/ERF domain
CDDcd000184.02E-16105140No hitNo description
SuperFamilySSF541713.86E-11105140IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MNRSEIARRS CSSAAKLSDR AVAPRKPVSG SGCGSGRRIV RIYVTDADAT DSSSSDDDDS  60
GAAIPFILGC RRRRRRVKRY DQGPRRRHQL PLPGAAQTNG AVDVGKRLWL GTFDTAEEAA  120
AVYDRAAVRI KGPDAVTNFP SPAPLKLTAP STCSLERLDP SPPPPLPASS SSSSPRPFAS  180
PTSVLRYGDG DGDPFDLLSY GYGEVDAFGF SLDPSPLCLT EPRFSPLARR PCWAEDVVAE  240
LGEFDADDFS LEVVLS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17078RRRRRRVKR
27186RRRRRVKRYDQGPRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020086780.11e-116pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLA0A199UPT96e-83A0A199UPT9_ANACO; Pathogenesis-related transcriptional activator PTI6
STRINGXP_008810850.13e-40(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15640615