PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco011731.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family WRKY
Protein Properties Length: 307aa    MW: 34213 Da    PI: 10.4371
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco011731.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.6e-31236293359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D ++WrKYGqK++kgs++prsYY+C+s  gCp++k+ver+ +d +++++tYeg+H h+
  Aco011731.1 236 DDFSWRKYGQKPIKGSPHPRSYYKCSSLrGCPARKHVERCLHDANMLIVTYEGDHSHP 293
                  99************************998****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.1E-12190232IPR018872Zn-cluster domain
PROSITE profilePS5081129.39229295IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.9E-32231294IPR003657WRKY domain
SuperFamilySSF1182901.83E-26232294IPR003657WRKY domain
SMARTSM007747.8E-37234294IPR003657WRKY domain
PfamPF031064.9E-26236293IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MNSTMNKEAS DDITILSAAQ RSINTAHHLF RCVVSQKPDR SASQELSVIA RETIAEFKNL  60
LSLLDGVTYP RDKRIRKGPL PTSNEINRAA LIERWTSPSC SKNTMNYNGV QLFQKLQSQA  120
YFAVPKCTSG MQFPGAMNQR LLFPLRRPIS SSIGMNPYKT NMHLVNHCFS SSVTQGSSIG  180
ESSMLSNHKR KHNSEGGMNC TASTGGCHCF KRRKPRNRTT IRVPAFSGNF ADIPPDDFSW  240
RKYGQKPIKG SPHPRSYYKC SSLRGCPARK HVERCLHDAN MLIVTYEGDH SHPRTALATS  300
SFMVTP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-22222292271WRKY transcription factor 1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1211217RRKPRNR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFQ3935646e-32FQ393564.1 Vitis vinifera clone SS0AFA25YF19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020094350.10.0probable WRKY transcription factor 11
TrEMBLA0A199UME90.0A0A199UME9_ANACO; Putative WRKY transcription factor 11
STRINGXP_008796831.11e-89(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4896222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.15e-51WRKY DNA-binding protein 11