PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco013436.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 1046aa    MW: 116533 Da    PI: 4.7587
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco013436.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.42.4e-22151541128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrk.nra....tksgyW 83 
                  lp+G++F+P+d++l+++ L+k  +gk           ++ik++d      +++P++Lp  +k++ +  y+F+++ k+++t+ +k  r+    + + +W
  Aco013436.1  15 LPRGVKFDPSDDDLLWHLLAKVGNGKAcphpfiG---DFIKSLDkeegFGYMHPQKLP-GIKHDGSASYYFHRTMKSHNTDCQKlLRIhcedAMDVMW 108
                  699************8877777777777754431...33444433333999*******.67778889999999999988765441453333345899* PP

          NAM  84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                   + g++++v+  +g++ g +k++v+y  +++ +k+ekt+W+mh+y+l
  Aco013436.1 109 CKIGRTEPVIM-DGSHEGFRKVFVLYisTAKGEKPEKTNWMMHQYHL 154
                  ***********.9999**********8755777788*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.63E-2510171IPR003441NAC domain
PROSITE profilePS5100524.45815172IPR003441NAC domain
PfamPF023655.9E-1016154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1046 aa     Download sequence    Send to blast
MGDVRPTCGG EWPGLPRGVK FDPSDDDLLW HLLAKVGNGK ACPHPFIGDF IKSLDKEEGF  60
GYMHPQKLPG IKHDGSASYY FHRTMKSHNT DCQKLLRIHC EDAMDVMWCK IGRTEPVIMD  120
GSHEGFRKVF VLYISTAKGE KPEKTNWMMH QYHLGTIEED EGEFVVSKLF YCRRSTKGGK  180
RKDRLRQKTI EMLAQEVSTS HSDVTATGPL VIYHANVVSE GNILQVAQEG GKSKDNDCDY  240
EQKSSHNHVL NSIQLDHAGA LRSEPATDDL DSINLLDRYN MLVSSRNLCS KNLDGWSRCD  300
IMATGPSEVG HADVTAEQNI SQVAQECHKS INNPCDYEEI SPQGEGLNCI PVDHARELAS  360
EPVINDLDHI SLQQRYNMLV SSRTSCSNDL GTSRCVEDCD LRAPKDSPLE ILDGEACGSI  420
PRSESYGMNH MKAESGQDIF DLMQDIVSGP PIVDNIGECC LENIQDVDHL PERELSSREW  480
LSDCVNESEA ANSAKNLILS SPNSVITGNN SIVDQFSPNP ANCQNNTSSK NSPFQHLSTE  540
VVNFKFDDAS KGSEITESQE EARNDECQNQ AYTPNAKPSS LSHKVSVQNE KGQISVSALA  600
MFPVDVKSEP LSEGENIDTM RNEGNCRLSL LNGHSSKSLA GSEDVFLNIN ASNGERSIIP  660
SDDSLAIPTA FVPEIVSTDA NDKILELKVK SEPVESELSE ISKKIPINIS ESDSAGAVVK  720
SENSDEDLTG HIHSVDFLDS ENGKNMNHQS LPKAAIDLND TVYTNASHSY RRKRKRTATD  780
SLETALEEDA PGLLKVLIER GITVEEIKLY GDAEDDDLLE ISSSESDFEE LETVITKLFS  840
ARESLLKFST ARHTKGSKAV YCLACLISLI EQTRYLRFRN SPVEWGWCRD LQSFIFVFKS  900
HNRIVLERPE YGYATYFFEI VESLPIDWQI KRLVIAMKLT SCSRTTLIEN KPLLVGEDLT  960
EGEARVLEEY GWVRNSGLGT MLNYCDRVVH DKRNERYSSD WRAKIGRLLM NGYEGGRIVL  1020
TELPSKVVNK FTVDQSPEIK LEDQL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1770775RRKRKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020104630.10.0uncharacterized protein LOC109721412
TrEMBLA0A199VIN50.0A0A199VIN5_ANACO; NAC domain-containing protein 8
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74793239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.14e-56NAC family protein