PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco013795.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 245aa    MW: 26235 Da    PI: 10.7315
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco013795.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.2e-184392255
          AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +grWvAeI+d      +r r +lg+f+tae Aa+a++ a++ l+g
  Aco013795.1 43 RFVGVRQRP-SGRWVAEIKD----SaQRVRLWLGTFDTAEAAARAYDDAARTLRG 92
                 589******.7*********....4456*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.4E-3543107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.7E-2843100IPR001471AP2/ERF domain
CDDcd000185.81E-174399No hitNo description
PROSITE profilePS5103220.58743100IPR001471AP2/ERF domain
PfamPF008471.0E-124392IPR001471AP2/ERF domain
PRINTSPR003671.1E-74455IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-1944100IPR016177DNA-binding domain
PRINTSPR003671.1E-76682IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MAGPQSPKPP APAITISTNR VSQPSSSSSA SGSSSSSSSS HRRFVGVRQR PSGRWVAEIK  60
DSAQRVRLWL GTFDTAEAAA RAYDDAARTL RGTNARTNFN PPLFNPNVAP DCNRFRFSPS  120
KARLSKRLHS RTSSEANSSE TRVSDQLTFA SVFRCRNNEY SFLSGTSAEK VVVQPSFVVP  180
PSAEELQVGW SSSELSGAYS PHGIGFRGFE ISECTNGSKR FKVASSVVVP PTFSALAHEP  240
SGES*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1538105976Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020114726.11e-175ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A199VQ511e-170A0A199VQ51_ANACO; Ethylene-responsive transcription factor RAP2-11
STRINGXP_008809070.15e-55(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124292634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-14related to AP2 11