PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco015158.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bHLH
Protein Properties Length: 177aa    MW: 20308.1 Da    PI: 10.3133
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco015158.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.46.8e-101464655
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                 + +E++RR++++  +++L +llP+  s+  +  l   + L +A +YIk +q
  Aco015158.1 14 KTVEKKRREQMKALYAKLDSLLPSsTSSREGATLPRPDRLSEAANYIKGMQ 64
                 689*********************655666667***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.64E-11681IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.321863IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-101284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00111469IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.3E-71464IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MESSHGTSTK LERKTVEKKR REQMKALYAK LDSLLPSSTS SREGATLPRP DRLSEAANYI  60
KGMQEKLERM KERKRQLMTR NEAADNSKLP KIEVQNRGSN LYMIQIVSSP DDRAMFYEAV  120
RAVEEEGGEV LNAQFSTTDR KAFHTIYALV GDFKYRFETG KLKERLKDLG WQGRRV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020088031.11e-128transcription factor bHLH36-like
RefseqXP_020088968.11e-128transcription factor bHLH36-like
TrEMBLA0A199VHN71e-106A0A199VHN7_ANACO; Uncharacterized protein
STRINGXP_008794132.18e-56(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119872938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-26bHLH family protein