PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco015614.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

GRAS

Protein Properties

Length: 134aa MW: 13823.7 Da PI: 8.6625

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco015614.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	42.1	1.4e-13	1	48	234	281
GRAS 234 lsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281 ++P vv+v+e+e ++++F++rf+ea++yy+a+f+s+ea++p+ s++ Aco015614.1 1 MNPAVVTVAEREGCGGGGNFVQRFVEAVDYYAAMFESMEATVPPGSRA 48 69*****************************************99965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03514	4.6E-11	1	48	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 134 aa Download sequence Send to blast
MNPAVVTVAE REGCGGGGNF VQRFVEAVDY YAAMFESMEA TVPPGSRAAP RARDRGRRRL 60 RRGGREFEFK FKCKLFAPAV RSVGGGDDCS GLRGAAAERV RAVAGAAAAA AALPFGGLQA 120 GDDEGCLLLG VAE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	50	60	RARDRGRRRLR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55580.1	2e-09	GRAS family protein

Link Out ? help Back to Top
Phytozome	Aco015614.1