PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco015674.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family G2-like
Protein Properties Length: 381aa    MW: 42845.8 Da    PI: 6.984
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco015674.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1017.8e-32205259155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  k+r+rWt++LHerFve+v++LGG+ekAtPk il+lmk +gLt++h+kSHLQkYR+
  Aco015674.1 205 KTRIRWTQDLHERFVECVNRLGGAEKATPKGILNLMKYEGLTIYHIKSHLQKYRI 259
                  68****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.359202262IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.8E-29203260IPR009057Homeodomain-like
SuperFamilySSF466896.99E-17203260IPR009057Homeodomain-like
TIGRFAMsTIGR015575.4E-24205260IPR006447Myb domain, plants
PfamPF002492.1E-8209258IPR001005SANT/Myb domain
PfamPF143793.4E-21289335IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MNTKRVAFSD RNYGSLNDSS HGTLNPKHCY AYYTPQQCNP NSFSSLLPTT GSNCVGSTPA  60
AFYAAEQLLG IPQFEYQIGD VPPPCRLPRR SSESGLSRRP DAYFCNNSVK NYDHGLHATN  120
ELLSVVKFPF QESRNSRALG NFDGFLCRSR PEDELQPILH RQEASRNTTV GCNASSSLAE  180
KPNQLVTNSA GSSSNVPSNL TVQNKTRIRW TQDLHERFVE CVNRLGGAEK ATPKGILNLM  240
KYEGLTIYHI KSHLQKYRIA KNIPEQTEGR NDRRTVDDIQ QLDPKTGVDI TEALRIQLDV  300
QRQLHEQLEV QRELQLRIEA QGRKLQQMFE QQMKTSRDIV ENQNYDMLFP DDAQVTLDDA  360
QISVLGGGSS ENSDFMSKID *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-24205261258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-24205261258Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-24205261157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-24205261157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-24205261157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-24205261157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-24205261258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-24205261258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-24205261258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-24205261258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-24205261258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-24205261258Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020109119.10.0protein PHOSPHATE STARVATION RESPONSE 1-like
RefseqXP_020109121.10.0protein PHOSPHATE STARVATION RESPONSE 1-like
RefseqXP_020109122.10.0protein PHOSPHATE STARVATION RESPONSE 1-like
RefseqXP_020109123.10.0protein PHOSPHATE STARVATION RESPONSE 1-like
TrEMBLA0A199UNC10.0A0A199UNC1_ANACO; Protein PHR1-LIKE 1
STRINGXP_008787370.11e-115(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69333751
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-61G2-like family protein