PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco016346.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 464aa    MW: 49311.6 Da    PI: 5.6328
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco016346.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-19242292256
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                   y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  Aco016346.1 242 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 292
                  59******9.**********955...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.34E-31241301No hitNo description
SuperFamilySSF541711.11E-22242300IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.9E-32242300IPR001471AP2/ERF domain
PROSITE profilePS5103222.932242299IPR001471AP2/ERF domain
SMARTSM003801.4E-39242305IPR001471AP2/ERF domain
PRINTSPR003679.9E-11243254IPR001471AP2/ERF domain
PfamPF008472.5E-12243292IPR001471AP2/ERF domain
PRINTSPR003679.9E-11265281IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MDRQRRSGGG GGGSRLGGRA KGKAVGSERS PTPVFDEASA PSPRPLKKIR SPERSLRSSA  60
SFSDDSAAAA YSSSSSPSSV SSASSSVSNL MNSPSFRPIF PFACEASHHH HHPLLPLFQT  120
TPPLPQQMIS FSHNPMYPTG AASYPPYLFS GNAASTITTT TATTTTTTTT TAIQQQQQQQ  180
QQQQQLMLLR YWSEALNLSP RGGGGHVAMM SRLAGGALPP MYASGLFRPP MLPGVPAPAN  240
KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG TFDTAEDAAL AYDREAFKLR GENARLNFPE  300
LFLGKSGRCD ADGAASSSVE KIQEPPPPTE SEPMDSAEET AAAETEESLS KEEESPPSEA  360
IAAEEAVHDG GGELVWGEAE EAWFSAWGPG SSVWDDVDGA NSLFLQSQLA TSGAANSEME  420
RSFPTALPPA AVATAACPDV TATATTASDP SSHPAPSMFM WKD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-20241299463ATERF1
3gcc_A3e-20241299463ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020083750.10.0ethylene-responsive transcription factor ERF054-like
TrEMBLA0A199VCQ90.0A0A199VCQ9_ANACO; Ethylene-responsive transcription factor ERF053
STRINGXP_008779564.14e-90(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36913268
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.13e-41ERF family protein