PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco016512.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

bZIP

Protein Properties

Length: 187aa MW: 20865.9 Da PI: 10.6003

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco016512.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.5	3e-13	26	86	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++kr +r+++NRe+ArrsRqRK++++eeL+ L+++ ++L l + + + ++l+ e+ Aco016512.1 26 DVKRRKRMASNRESARRSRQRKQQQLEELKSLLGCLKQQKQQLLCSLGSTESHLSALQGEN 86 68*****************************************999999999988887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.1E-8	22	82	No hit	No description
SMART	SM00338	1.4E-11	24	88	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.002	26	89	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.77E-9	27	82	No hit	No description
Pfam	PF07716	1.6E-8	28	72	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	31	46	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence Send to blast
MASSSGTTTT TTTSGSSEEE LQVQMDVKRR KRMASNRESA RRSRQRKQQQ LEELKSLLGC 60 LKQQKQQLLC SLGSTESHLS ALQGENSKKK KKKKKMSKYF SMLADMPTIC PRGKDGEGPY 120 IVQSQSRRWL VMIHTPLEKQ PIEYQMAGTT HIEPSWVGPE ARPLIWHGSG RVESGFVSDL 180 ANGRVG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	40	46	RRSRQRK
2	40	47	RRSRQRKQ
3	88	94	KKKKKKK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020099304.1	4e-31	bZIP transcription factor 11-like

Link Out ? help Back to Top
Phytozome	Aco016512.1