PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco016723.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 414aa    MW: 46039.4 Da    PI: 7.204
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco016723.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-10104137538
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                  k  rr+++NReAAr+sR+RKka++++Le    +L
  Aco016723.1 104 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKL 137
                  6789***********************9754444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.4E-5100176IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-7101146No hitNo description
PROSITE profilePS502178.898102146IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-7104145No hitNo description
PfamPF001706.7E-8104144IPR004827Basic-leucine zipper domain
CDDcd147088.11E-23104156No hitNo description
PROSITE patternPS000360107122IPR004827Basic-leucine zipper domain
PfamPF141441.4E-31184259IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MGVENVVRRE KVSQMASHGV GETGFPETGP SSQPLGYGAH AISPAAMNFF DQDGAAYFGE  60
LEEALMQGVV GIRGDGERKS FFTTRPPTLD IFPSWPMRFH QTPKTLRRLA QNREAARKSR  120
LRKKAYVQQL ESSRIKLAQL EQDLQRARSQ GLILGGSSAG GNISSGAAIF DMEYARWLDE  180
NYKHMTELRG VLQTHLTDGE LRVIVDGCLT HYDEIFRLKG IAAKSDVFHL ITGMWKTPAE  240
RCFLWMGGFR PSELLKILIP QLDPLTDQQL VGICNLQQSS QQAEEALSQG LEQLHQSLSE  300
TVASGSLIEC IDVGNYMGHM AIALEKLANL EGFVRQADNL RQQTVHQLHR ILTIRQAARC  360
LLAIGEYHSR FRALSSLWAT RPRETLVPDD SNCNAAAELQ IIHQPAQSHF SAF*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM6608232e-94KM660823.1 Ananas bracteatus clone 33486a microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020106577.10.0transcription factor TGA2.2-like isoform X1
RefseqXP_020106578.10.0transcription factor TGA2.2-like isoform X2
SwissprotQ53Q701e-168TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLA0A199V3X60.0A0A199V3X6_ANACO; TGACG-sequence-specific DNA-binding protein TGA-2.1
STRINGXP_008804825.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-131bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]