PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco016902.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 185aa    MW: 19637.1 Da    PI: 10.1588
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco016902.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-161464155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                 +++ GVr+++ +grWvAeI+       ++ r +lg+f tae+Aa+a+++a++ + g
  Aco016902.1 14 TKFVGVRQRP-SGRWVAEIKG----TtQKIRMWLGTFETAEDAARAYDEAARIMCG 64
                 699*******.7******766....1346**********************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.5E-121463IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-191573IPR016177DNA-binding domain
PROSITE profilePS5103218.7161572IPR001471AP2/ERF domain
CDDcd000186.54E-301574No hitNo description
Gene3DG3DSA:3.30.730.101.8E-281572IPR001471AP2/ERF domain
SMARTSM003801.8E-341578IPR001471AP2/ERF domain
PRINTSPR003679.3E-81627IPR001471AP2/ERF domain
PRINTSPR003679.3E-83854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MVTXAAAAAA TAATKFVGVR QRPSGRWVAE IKGTTQKIRM WLGTFETAED AARAYDEAAR  60
IMCGPRARTN FAYTANSASP PPNHPKFLSA ALTAKLHRLN LVSSLQSATA LQPMTAAAKD  120
AARRAQKKPA AAAVTKAKAA AAAAGTDSSA EVHFSYLEDR QHIEQMIEEL LDSNLYMELS  180
SSPQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-131678669ATERF1
3gcc_A1e-131678669ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00526DAPTransfer from AT5G25190Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020083529.11e-130ethylene-responsive transcription factor ERF003-like
TrEMBLA0A199VA961e-87A0A199VA96_ANACO; Ethylene-responsive transcription factor ERF003
STRINGXP_008806298.16e-48(Phoenix dactylifera)
STRINGGSMUA_Achr7P19320_0013e-48(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141835118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-23ERF family protein