 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aco017113.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
bZIP |
| Protein Properties |
Length: 425aa MW: 46768.8 Da PI: 6.5893 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco017113.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 35.4 | 2.4e-11 | 171 | 200 | 5 | 34 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeek 34
k rr+++NReAAr+sR+RKka+i++Le
Aco017113.1 171 KILRRLAQNREAARKSRLRKKAYIQQLESS 200
5679***********************975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 425 aa
Download sequence Send
to blast |
MGDNCRGSSK EGEQQQQQQQ QQQLLQQQVL HSCCSSSSGM IGPSSSMSKD SGAYDLAELD 60
QALFFYLDGN DQSSLVQAQR QTLNIFPSEP MHVEDPSSKG AMTMIPDGGS SKKPLNKPME 120
LTGKEKSDPS IPHPDDQRKE ITKTSIKRGG NGKGTTTSSS EHEGPKTPDP KILRRLAQNR 180
EAARKSRLRK KAYIQQLESS RVRLIQLEQD LQRARSTQGT LLSGIAAVVG DQGLANSTSS 240
CTGTSSEAAM FDVEYRRWLE EHHKLMLQLR AAVESNLADG QMQMFVEAAV SHYDVLMGLK 300
GVIVRADAFH LMSGTWKTPA ERCFVWIGDF RPSELIKVVR KYLEPLSEPQ MLGIYSLQQS 360
VHESEDALNQ GLEAVHQSLS DTISSEVMSS PPDMATYTAH LSLALDKLAS LEAFVRQTTR 420
LIVV*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK106988 | 3e-31 | AK106988.1 Oryza sativa Japonica Group cDNA clone:002-120-A05, full insert sequence. |
