PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco017803.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 245aa    MW: 25404.8 Da    PI: 8.8307
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco017803.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.91.9e-215099255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+taeeAa a+++a+++++g
  Aco017803.1 50 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEEAAIAYDEAALRFKG 99
                 7********.**********94....45***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.0E-3349108IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-2350108IPR016177DNA-binding domain
CDDcd000184.34E-3250108No hitNo description
PfamPF008471.5E-145099IPR001471AP2/ERF domain
SMARTSM003803.1E-3850113IPR001471AP2/ERF domain
PROSITE profilePS5103224.88250107IPR001471AP2/ERF domain
PRINTSPR003674.9E-125162IPR001471AP2/ERF domain
PRINTSPR003674.9E-127389IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MSGAAAEAAA AAEEEEIIAQ GGVGGGGAEG AEGDSHVLSR FSARDVRRRH YRGVRQRPWG  60
KWAAEIRDPK KAARVWLGTF DTAEEAAIAY DEAALRFKGT KAKLNFPERV QGRTGLGFLV  120
TPGLPGRPVG PVSAAAASSY PDLIQYAQLL QSGDEDIGNV ASHLYTSGSS SSSSSSSTAA  180
PFSGPTSQMS TMSISGPSQQ ILDFSSQQLR SATSFSSSTT SSSSSSSSSR ARGDQRGKDT  240
SYNP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-2749111467ATERF1
3gcc_A3e-2749111467ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020111271.11e-121ethylene-responsive transcription factor ERF113-like
TrEMBLA0A199V6191e-140A0A199V619_ANACO; Ethylene-responsive transcription factor ERF113
STRINGXP_008791015.14e-76(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44473571
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.13e-24related to AP2 6l