PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco017940.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 237aa    MW: 25636.7 Da    PI: 9.5863
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco017940.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-1869122256
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  +y+GVr+++ +gr++AeIrdp+ +g   r++lg+f++a  Aa+a+++a+ +++g+
  Aco017940.1  69 RYRGVRRRP-WGRFAAEIRDPRRRGGGSRVWLGTFDSAVAAARAYDRAAFAMRGA 122
                  6********.**********9885546*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.8E-3269135IPR001471AP2/ERF domain
SuperFamilySSF541715.36E-2069130IPR016177DNA-binding domain
CDDcd000182.41E-1569130No hitNo description
PROSITE profilePS5103223.65769129IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.0E-2969130IPR001471AP2/ERF domain
PfamPF008477.7E-1369121IPR001471AP2/ERF domain
PRINTSPR003675.0E-137081IPR001471AP2/ERF domain
PRINTSPR003675.0E-13111131IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MALDSTLARI REHLLGGGDS ASSHLVQPPE PHPQTLNLTL AEPYDADNSA YLGSVDGGGA  60
GDGWRRGERY RGVRRRPWGR FAAEIRDPRR RGGGSRVWLG TFDSAVAAAR AYDRAAFAMR  120
GAKAILNFPN EIGCGTLNLH RRSIPPPPPH RTAGKRRRGR VGEGEAMMIT ATTTTTTTTR  180
ERVEGIEYGE GNIPLECELT PSSRRSGCDG EVADVERIFE APSPLSPRPP LHFSSL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-2655136179Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020096569.11e-170ethylene-responsive transcription factor ERF105-like
TrEMBLA0A199UFV41e-169A0A199UFV4_ANACO; Ethylene-responsive transcription factor ERF105
STRINGXP_010275423.12e-37(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-10ethylene responsive element binding factor 5