PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco018079.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

bZIP

Protein Properties

Length: 276aa MW: 29827.4 Da PI: 5.9039

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco018079.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.7	8e-11	163	198	11	46
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 11 qkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 q+NR +A+rsR RK+++i+eLe+ v +L++e +aL Aco018079.1 163 QSNRQSAQRSRVRKLQYIAELERSVTTLQTEVSALS 198 89****************************998886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.1E-6	153	217	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.63E-9	163	211	No hit	No description
Pfam	PF00170	6.7E-9	163	205	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.7E-11	164	211	No hit	No description
CDD	cd14703	5.63E-18	164	208	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence Send to blast
MAQLPPKIPC SMMTCSLNWP AAAATTTSAA TLQPSWVDEF LDFSAAKRGA HRRSVSDSGP 60 FLEAGPAAPA AEFDRLDDDQ LMSMFSDDAG APPPPMPMPM PMPQPPPSAS SAPSTPSDHN 120 SVSDDKAAAG AAECEEAQSQ CEAEQGHQES QKVSEPNGRI TPQSNRQSAQ RSRVRKLQYI 180 AELERSVTTL QTEVSALSPR VAFLDHQRSI LSVGNSHLKQ RIAALAQDKI FKDAHQEALK 240 KEIERLRQVY HQQNLKKMST PTSEPVVCTE NGLLS*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020098287.1	1e-134	LOW QUALITY PROTEIN: basic leucine zipper 61-like
Swissprot	Q9M2K4	4e-86	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A199UQM5	1e-126	A0A199UQM5_ANACO; Basic leucine zipper 61
STRING	XP_008790058.1	1e-105	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1322	38	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	3e-70	bZIP family protein

Link Out ? help Back to Top
Phytozome	Aco018079.1

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]