PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco020562.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 467aa    MW: 52552.5 Da    PI: 5.2608
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco020562.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.31e-5191361128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                  l pGf FhPtd el+++yLk+kv+g+k+++ ++i+evdiyk+ePwdLp+  k+ +++++w+fF++rd+ky++g+r+nrat+ gyWk+tgkd++++s +
  Aco020562.1   9 LLPGFGFHPTDVELISHYLKRKVHGQKIDF-NIIPEVDIYKHEPWDLPAkcKIPTRDSKWHFFTSRDRKYPNGSRSNRATEGGYWKSTGKDRNIKS-Q 104
                  579***************************.99***************5346667999**************************************.9 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  ++++g kktLvf++gr p+g++tdW+mhey +
  Aco020562.1 105 NRVIGSKKTLVFHEGRPPSGKRTDWIMHEYYI 136
                  999***************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-604159IPR003441NAC domain
PROSITE profilePS5100556.6329159IPR003441NAC domain
PfamPF023656.0E-2511135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MESLSATSLL PGFGFHPTDV ELISHYLKRK VHGQKIDFNI IPEVDIYKHE PWDLPAKCKI  60
PTRDSKWHFF TSRDRKYPNG SRSNRATEGG YWKSTGKDRN IKSQNRVIGS KKTLVFHEGR  120
PPSGKRTDWI MHEYYIDENE CKAAPDMKDA YVLCRVTKRN GLPSEADNSP LPEEVNNHPQ  180
QPNETTESVI CHKSTSPADN VDDIEDWLNE LLDPNFSGIT APEDLKVEPE EGVTSVEPKL  240
EPVDSSVEQN ILDDSNFLLE EDIYSILYSN PDSYNYNLFE DLAMGNTDAP FASNGNWLTE  300
SNHNFPATNL EDEFFDGKAL THMNENNDAG IQIRKRHKKV AEASGTKSRL QVQLHKMETR  360
EAESVNQSVK LVDHYSLVDL VKEITESKSS LGSDDDSPKS GTLINGISYN RSVIRGFFVP  420
LRDRTSAGLK RLFVGAFTVA IVGLILYVLF QYASRFTGSF SSIGYS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-47815614165Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020097616.10.0NAC domain-containing protein 74-like isoform X2
TrEMBLA0A199W4420.0A0A199W442_ANACO; NAC domain-containing protein 74
STRINGXP_008784959.11e-153(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75603847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.12e-73NAC domain containing protein 57