PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco023735.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

bZIP

Protein Properties

Length: 163aa MW: 17613.7 Da PI: 8.3519

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco023735.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.9	3.8e-12	33	83	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 ++++r+ +NRe+ArrsRqRK++ ++eL v +L++e + + + +++ Aco023735.1 33 RKQKRMLSNRESARRSRQRKQKHLDELMASVNQLQKEKAQILSAIAFTSQH 83 79************************************9988877655555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.0E-16	29	93	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.013	31	94	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.7E-10	32	76	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.4E-10	33	79	No hit	No description
SuperFamily	SSF57959	3.66E-11	33	87	No hit	No description
CDD	cd14702	7.04E-16	34	85	No hit	No description
PROSITE pattern	PS00036	0	36	51	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence Send to blast
MASSSGTSSG SSSAQLQNSA SSEEDLRALM KQRKQKRMLS NRESARRSRQ RKQKHLDELM 60 ASVNQLQKEK AQILSAIAFT SQHHALLEAD NSVLRTQAVE LRSRLQSLDH ILCFLNGTGS 120 TAPSSDESYY AGFEASESCM RHHPLVASAD IGGGGACDVC ML*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	45	51	RRSRQRK
2	45	52	RRSRQRKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KM663699	1e-161	KM663699.1 Ananas bracteatus clone 48236b microsatellite sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020100850.1	1e-104	bZIP transcription factor 11-like
TrEMBL	A0A199UIX9	1e-102	A0A199UIX9_ANACO; Ocs element-binding factor 1
STRING	cassava4.1_028474m	4e-40	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4459	33	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	2e-32	basic leucine-zipper 44

Link Out ? help Back to Top
Phytozome	Aco023735.1