PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco030561.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

bHLH

Protein Properties

Length: 179aa MW: 19680.2 Da PI: 8.9312

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco030561.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.6	2.1e-08	97	143	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h+ +Er RR+riN+++ L+el+P + k + a +L + ++Y++sL Aco030561.1 97 SHSVAERLRRERINERMRCLQELVPGC----YKEMGMAGMLDEIINYVQSL 143 8*************************8....36688899999999999888 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	2.50E-9	91	148	No hit	No description
SuperFamily	SSF47459	1.83E-16	91	161	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.904	93	143	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.3E-16	93	155	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.1E-5	97	143	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.6E-8	99	149	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence Send to blast
MGLHNNSPLT HENTSPSTVE ISWGHIKKKG EAAAPDSSQS SATPRLENGY SQENVARKKS 60 SLGGGGGGRR GRRCSKEEKK AKEVVHVEAR RGQATDSHSV AERLRRERIN ERMRCLQELV 120 PGCYKEMGMA GMLDEIINYV QSLKNQVEFL SMKLSAASSF YDFNLDCDQP MAAPQVLL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	107	RLRRER

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020080726.1	1e-121	transcription factor BEE 3-like
TrEMBL	A0A2H3YEZ1	6e-59	A0A2H3YEZ1_PHODC; transcription factor bHLH75-like isoform X1
STRING	XP_008797805.1	1e-59	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15639	6	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18400.1	1e-35	BR enhanced expression 1

Link Out ? help Back to Top
Phytozome	Aco030561.1