PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco031075.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 180aa    MW: 19866.4 Da    PI: 10.0464
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco031075.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.35.9e-21958255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f+tae Aa a+++a+++++g
  Aco031075.1  9 HYRGVRRRP-WGKWAAEIRDP---N-KaARVWLGTFDTAERAAMAYDEAALRFKG 58
                 8********.**********9...3.35***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.68E-32867No hitNo description
Gene3DG3DSA:3.30.730.101.3E-32867IPR001471AP2/ERF domain
SMARTSM003807.1E-36972IPR001471AP2/ERF domain
PfamPF008475.3E-15958IPR001471AP2/ERF domain
PROSITE profilePS5103224.856966IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-22967IPR016177DNA-binding domain
PRINTSPR003677.8E-121021IPR001471AP2/ERF domain
PRINTSPR003677.8E-123248IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MIILERRKHY RGVRRRPWGK WAAEIRDPNK AARVWLGTFD TAERAAMAYD EAALRFKGSK  60
AKVNFPERAV LLKHHNVNID RRPEQPPLLP PPTMINPNTT TTTTAATATA TTTATATATA  120
GAYPNIIQYV NILQSNEEMP STYMDFSLGH IMTSSNVGSY SSSSSGCSWS HGEPREKDT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-25868465ATERF1
3gcc_A2e-25868465ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1515RRKHYRGVRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020080640.11e-129ethylene-responsive transcription factor ERF113-like
TrEMBLA0A2G3D2635e-39A0A2G3D263_CAPCH; Ethylene-responsive transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44473571
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07310.12e-28ERF family protein