PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco031345.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 312aa    MW: 34566 Da    PI: 9.7721
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco031345.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.92.6e-1255126182
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgkrknratksgy 82 
                  lp Gf F+P+deel+v+yL++  +g+     +++ e+++y++ Pw+L     ++++++ yf +kr +   +g+r +r+t  g 
  Aco031345.1  55 LPLGFIFNPKDEELIVHYLCAYPAGRW----DHVVEAEVYSTRPWSLL----GDDSKIgYFLTKRTR---HGNRVKRTTGGGH 126
                  699*******************99998....45689***********6....345555377777766...5889999999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.06E-1449126IPR003441NAC domain
PROSITE profilePS5100514.73555215IPR003441NAC domain
PfamPF023651.4E-556125IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MMMNRVGIGR VRDSELPHST PIRVLVSMVQ QCHPSSHGRA LWLRRPWQSR SEASLPLGFI  60
FNPKDEELIV HYLCAYPAGR WDHVVEAEVY STRPWSLLGD DSKIGYFLTK RTRHGNRVKR  120
TTGGGHGPAK PRKKRSCPPA VKSLASKRCS RSVLVATATA PRNHPRRPPD IGIARTGLVL  180
HQEERTRDRE ESQEKAGGSA TRTRSRNQYC NIQSQRQQQA RHPTQIFEAS LEHDNSNSIS  240
SCILATPESA FSEYADPTTF TNEALALFGI PSCLFATDRS SALLLYLSAA ASPEGDAADA  300
INLVYDGFCS R*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020087091.11e-124NAC domain-containing protein 68-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.12e-09NAC domain containing protein 41