PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy000617
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MIKC_MADS
Protein Properties Length: 374aa    MW: 42451.6 Da    PI: 8.6119
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54176568PU_unrefUnigeneView CDS
gnl|UG|Ahy#S58462576PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-2655PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF61.87.6e-201053245
               ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
     SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
               + en   rq t++kR+ngi+KKA ELS+LCd+++ +++fs+tgk
  Ahy000617 10 KLENMNGRQATYAKRKNGIIKKATELSILCDIDIILLMFSPTGK 53
               6799999***********************************97 PP
2K-box14.81.2e-061101811082
      K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLs.lkeLqqLeqqLekslkkiRskKnellleqieelqk 82 
                ++++ e l+++++ L+ +i++ q  +R  ++++ e+++ +++L+q+e+ L +s+++iR++K+++  +q+  lq 
  Ahy000617 110 SSQTIEDLSNQARLLQTQISETQ--KRLSQWKEFEKINnVEQLEQMENSLRDSINQIRNRKEHIKNQQLVSLQC 181
                34445555555555555555544..46778999999963889*********************99999888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004321.5E-26160IPR002100Transcription factor, MADS-box
PROSITE profilePS5006623.422153IPR002100Transcription factor, MADS-box
CDDcd001204.67E-23254No hitNo description
SuperFamilySSF554558.37E-24295IPR002100Transcription factor, MADS-box
PRINTSPR004043.7E-16323IPR002100Transcription factor, MADS-box
PfamPF003191.2E-171154IPR002100Transcription factor, MADS-box
PRINTSPR004043.7E-162338IPR002100Transcription factor, MADS-box
PRINTSPR004043.7E-163859IPR002100Transcription factor, MADS-box
PROSITE profilePS512976.715107201IPR002487Transcription factor, K-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MGRVKLKIKK LENMNGRQAT YAKRKNGIIK KATELSILCD IDIILLMFSP TGKPSLCRGR  60
RSNFEEVIAK FSQLTPQKRA KRKLESLEAL KKTFKKLDHD VNIQEFLGTS SQTIEDLSNQ  120
ARLLQTQISE TQKRLSQWKE FEKINNVEQL EQMENSLRDS INQIRNRKEH IKNQQLVSLQ  180
CNNQFNEMHI PFRMGTEQHL QPLPWIGNGD SPNLVLPDDS SLLLHKDVEG SASSSFGSYA  240
SYIGSSSKTD ISNSGQENGV LSDLSSTTAP LRLPLNNGHQ FPYMPSYNFN LLNDFKFQAA  300
PEMNHHHNQP QENHNLSFHH HVNNGNFEAP RNAYDSNHHH HHGWASTSGP CAVTMSDEHL  360
YAQASLPQVN FGST
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that forms heterodimers with the MADS-box proteins AGL66 and AGL104 and is involved in the regulation of pollen maturation at the late stages of pollen development and pollen tube growth. {ECO:0000269|PubMed:19211705}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015956913.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_015956915.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_016190919.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_016190920.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_020975401.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_020994910.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_025639091.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_025639092.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_025690783.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_025690784.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_025690785.10.0agamous-like MADS-box protein AGL30 isoform X1
RefseqXP_029147616.10.0agamous-like MADS-box protein AGL30 isoform X1
SwissprotQ1PFA41e-102AGL30_ARATH; Agamous-like MADS-box protein AGL30
TrEMBLA0A444ZUG40.0A0A444ZUG4_ARAHY; Uncharacterized protein
STRINGXP_007158646.10.0(Phaseolus vulgaris)
Publications ? help Back to Top
  1. Zhang S, et al.
    FERTILIZATION-INDEPENDENT SEED-Polycomb Repressive Complex 2 Plays a Dual Role in Regulating Type I MADS-Box Genes in Early Endosperm Development.
    Plant Physiol., 2018. 177(1): p. 285-299
    [PMID:29523711]