PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy001264
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 280aa    MW: 31444.1 Da    PI: 7.4745
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58458718PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-6276PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.4e-18124178256
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                rk+ +++k+q  +Lee F+++++++ +++  LAk+lgL  rqV vWFqNrRa+ k
  Ahy001264 124 RKKLRLSKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTK 178
                788899***********************************************98 PP
2HD-ZIP_I/II126.98.9e-41124213191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  +kk+rlsk+q+++LEesF+e+++L+p++K +la++Lgl++rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
    Ahy001264 124 RKKLRLSKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 213
                  69*************************************************************************************9.55 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046181.9E-22194IPR006712HD-ZIP protein, N-terminal
SuperFamilySSF466893.38E-18111181IPR009057Homeodomain-like
PROSITE profilePS5007117.313120180IPR001356Homeobox domain
SMARTSM003895.4E-16122184IPR001356Homeobox domain
PfamPF000464.6E-16124178IPR001356Homeobox domain
CDDcd000864.82E-15124181No hitNo description
Gene3DG3DSA:1.10.10.601.8E-17124178IPR009057Homeodomain-like
PRINTSPR000312.3E-5151160IPR000047Helix-turn-helix motif
PROSITE patternPS000270155178IPR017970Homeobox, conserved site
PRINTSPR000312.3E-5160176IPR000047Helix-turn-helix motif
SMARTSM003404.2E-27180223IPR003106Leucine zipper, homeobox-associated
PfamPF021832.1E-11180214IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MENQDLGLSL SLSFPQQQLN LIPSPYKTPS WNNQPFNSSD NRDSETCRGS AEGGSFLLRG  60
IDVNSLPSGV DCEDDAGVSS PNSTVSSVSG KRSSEREQNN AEDHDTERAS SRGISDEEDG  120
ETSRKKLRLS KDQSAVLEES FKEHNTLNPK QKLALAKQLG LRARQVEVWF QNRRARTKLK  180
QTEVDCEFLK RCCENLTEEN RRLQKEVQEL RALKLSPQFY MQMSPPTTLT MCPSCERVAV  240
PPSAVDPATR HHQMPQPHHH TRPIPIGPWA AAPPVFRPRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122128SRKKLRL
2172180RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that plays a role in auxin-mediated morphogenesis. Negatively regulates lateral root elongation. {ECO:0000269|PubMed:12492842}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By indole-3-acetic acid (IAA). {ECO:0000269|PubMed:12492842}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025651727.10.0homeobox-leucine zipper protein HAT4-like
RefseqXP_025698379.10.0homeobox-leucine zipper protein HAT4-like
SwissprotP466011e-104HAT2_ARATH; Homeobox-leucine zipper protein HAT2
TrEMBLA0A444WUH40.0A0A444WUH4_ARAHY; Uncharacterized protein
STRINGXP_007155694.11e-141(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.19e-78homeobox protein 2
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zou LJ, et al.
    Role of Transcription Factor HAT1 in Modulating Arabidopsis thaliana Response to Cucumber mosaic virus.
    Plant Cell Physiol., 2016. 57(9): p. 1879-89
    [PMID:27328697]