PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy001738

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

ERF

Protein Properties

Length: 241aa MW: 27261.1 Da PI: 10.3641

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-171a-Arachis_hypogaea-14723	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	65.1	1.4e-20	96	146	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + k r++lg+f+ta eAa+a+++a+ k++g Ahy001738 96 HYRGVRRRP-WGKFAAEIRDP---NrKGSRVWLGTFDTAIEAARAYDRAAFKMRG 146 8******.******9...6566***********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.730.10	2.5E-33	95	155	IPR001471	AP2/ERF domain
CDD	cd00018	1.23E-33	95	154	No hit	No description
Pfam	PF00847	3.6E-15	96	146	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	24.671	96	154	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	8.5E-24	96	156	IPR016177	DNA-binding domain
SMART	SM00380	2.1E-38	96	160	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.0E-10	97	108	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.0E-10	120	136	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence Send to blast
MSISDHLQPQ RTNNIKPNYV SSHPNNIQIP QTQASFSMPP TSSNLSNRKP FLKKISIPST 60 RTSPHNGPSH NKMKEQPLIA ATKVSRKIVT RNEDKHYRGV RRRPWGKFAA EIRDPNRKGS 120 RVWLGTFDTA IEAARAYDRA AFKMRGSKAI LNFPLEVGEY SEECSVSCSI MKVGEKRRRE 180 NDEEGSENVV ESNNKKQVKK EECFTVCPLT PSCWKGFWDT EVMGTIFSVP PLSPLSPLMV 240 V

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1gcc_A	1e-31	95	157	1	63	ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020971513.1	1e-152	ethylene-responsive transcription factor ERF105
Refseq	XP_020971514.1	1e-152	ethylene-responsive transcription factor ERF105
Refseq	XP_025632953.1	1e-152	ethylene-responsive transcription factor ERF105
Swissprot	Q8VY90	2e-57	EF105_ARATH; Ethylene-responsive transcription factor ERF105
TrEMBL	A0A445EEF0	1e-147	A0A445EEF0_ARAHY; Uncharacterized protein
STRING	XP_007145468.1	3e-88	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51190.1	2e-44	ERF family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Moore M,Vogel M,Dietz K The acclimation response to high light is initiated within seconds as indicated by upregulation of AP2/ERF transcription factor network in Arabidopsis thaliana. Plant Signal Behav, 2014. 9(10): p. 976479 [PMID:25482793] Bolt S,Zuther E,Zintl S,Hincha DK,Schmülling T ERF105 is a transcription factor gene of Arabidopsis thaliana required for freezing tolerance and cold acclimation. Plant Cell Environ., 2017. 40(1): p. 108-120 [PMID:27723941] König K,Vaseghi MJ,Dreyer A,Dietz KJ The significance of glutathione and ascorbate in modulating the retrograde high light response in Arabidopsis thaliana leaves. Physiol Plant, 2018. 162(3): p. 262-273 [PMID:28984358]