PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy001917
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 226aa    MW: 25279.6 Da    PI: 7.9029
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54171662PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-1426PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.21.9e-17156190135
       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                C++C +  Tp+WR gp g+ktLCnaCG++y++ +l
  Ahy001917 156 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 190
                *******************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004016.4E-15150204IPR000679Zinc finger, GATA-type
SuperFamilySSF577165.23E-15151214No hitNo description
PROSITE profilePS5011411.108154186IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.109.3E-14154188IPR013088Zinc finger, NHR/GATA-type
CDDcd002023.81E-12155202No hitNo description
PfamPF003203.9E-15156190IPR000679Zinc finger, GATA-type
PROSITE patternPS003440156181IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
XQQEPFFNRT TEAKQQQXIP HYKTFQSLVR LEAKERGSQQ LPTDEEPKLL SAFGHTKXDE  60
PLISDPPLLK QTYWLADSEL FVLPKRQKKD SGKDVIAKDG DDDDKDGGGE KGAVVMKRGS  120
LVSLEECSEA EEDGDGGNNN NNNNNNNGEN PMPRRCTHCL AQRTPQWRAG PLGPKTLCNA  180
CGVRYKSGRL LPEYRPAKSP TFVSYLHSNS HKKVMEMRMA GSVLHS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016162144.11e-123GATA transcription factor 2
RefseqXP_025658482.11e-123GATA transcription factor 2
TrEMBLA0A444YRJ51e-121A0A444YRJ5_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.17e-36GATA transcription factor 4