PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy002866
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NF-YB
Protein Properties Length: 151aa    MW: 16760.8 Da    PI: 5.4917
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58463591PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-4180PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB44.83e-1412106695
      NF-YB   6 rflPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                ++lP + v ri+k  +    +++ is  kda     e +  fi ++++ a+d c++ kr+ +n+dd++ al +  f +++ plk+ l+ +r+ ++
  Ahy002866  12 EELPRTIVRRIVKDKISrcsEDGDISvnKDALLAFSESARIFIHYISATANDICKESKRQIVNADDIFKALEETDFSEFIRPLKASLEDFRKKNA 106
                57888999999998875222455554338999999********************************************************8765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.108.5E-3210138IPR009072Histone-fold
PfamPF008082.7E-101382IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
SuperFamilySSF471132.19E-2414135IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MAEEAKAVPE AEELPRTIVR RIVKDKISRC SEDGDISVNK DALLAFSESA RIFIHYISAT  60
ANDICKESKR QIVNADDIFK ALEETDFSEF IRPLKASLED FRKKNAGKKA AVSKEKESEK  120
NKKRKVEGEP SGKVKSDNGE SPEKGDSGDA E
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025683426.11e-103DNA polymerase epsilon subunit 3
TrEMBLA0A445E5481e-101A0A445E548_ARAHY; Uncharacterized protein
STRINGGLYMA11G18960.17e-69(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.14e-43nuclear factor Y, subunit B11