PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy002898
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 148aa    MW: 15820.4 Da    PI: 10.7535
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54104788PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-9438PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-183366134
       GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
               C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk+
  Ahy002898 33 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKK 66
               ********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577167.13E-132667No hitNo description
PROSITE profilePS5011412.4262763IPR000679Zinc finger, GATA-type
SMARTSM004011.1E-102787IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.109.5E-163167IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.54E-113289No hitNo description
PROSITE patternPS0034403358IPR000679Zinc finger, GATA-type
PfamPF003201.4E-163367IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MVDSTGKGSD SDDASPNSAA AGKSPTTEQK KTCADCGTSK TPLWRGGPAG PKSLCNACGI  60
RSRKKKRAIL GITRGTTTDD VKKGKRSNTV ANSNNNKFGD SFSFKKRWIT MARQRSNPAT  120
ATGTSWERKN KLLSCSCLSL MDPVYAXX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016197861.13e-81GATA transcription factor 16
RefseqXP_025630167.13e-81GATA transcription factor 16
TrEMBLA0A445ELY52e-77A0A445ELY5_ARAHY; Uncharacterized protein
STRINGXP_004508168.15e-38(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.15e-25GATA transcription factor 15